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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015890407.1_cds_XP_016445100.1_40090
CDS Infomation

[gene=LOC107770319] [db_xref=GeneID:107770319] [protein=rust resistance kinase Lr10-like isoform X2] [protein_id=XP_016445100.1] [location=complement(join(126533..127635,128037..128057,129409..130318))] [gbkey=CDS]
Sequence

ATGGAGACGCGCAGAACAAATATAACAAACAGTGCACGGCTAATCATAGACGACTGGATT
TTGACTTCCTTACCATATAGTTCACATCACACATCACATCAGTGTAGCCTCGTTCCATCT
GCAGATATGATGTTGGAAAGACGACTCTGGATTGCTACTCTTATAGTAATAATTTGCACA
ACCATTGTTAAAGCCCAAAATGTTACTCACTGTACTTCTTCTTGCGGTGATATTCATAAC
ATCAGCTTTCCTTTTCGATTGAAAGCTGATCCCCACAACTGTGGTGATTCAAGGTTCGAG
CTCGATTGCCAGAACAACCGTACTGTCATAAGTTTGAGTACTTTCATAAGTTCGGACGCA
GGAATATATAACGTGCTAGAAATCAACTATGATAATTTCATTATCAGAGCAATTGACCCT
GGTGTGGAGCATCAAATTAGCAGGAACTGCACTACTTCTCCCAATAACTTCCGCATGTTT
GCTCCTACCGCCTCAGCTTTTGACAGTATTAGTTCGAACCGTCCCATTCTTTATGTCAAT
TGTTTAGCCACTGTAAAGTCTTCCAGCTATGTGGAGACTACTTTCTGTGGTTCACAGAAC
AAGACTACTACTACTTCTTCTGAGAGTCATAGCTATCTCACCACTGGACAGGACATGACG
ATTTCGGATTTGGCAGAGAATTGCAGCGTTGAAATGGTTGCCTGGACTTCAGCCCGGGGA
CTTTCAGTGGATAATAATTCTCTATCGAGCATTCATGCGGCACTGACAGATGGGTTTGAA
CTTTCTTGGAAACGTGCCTTTATGTGCAGAGAATGTGAAGCGAGAGGAGCCTTCTGTTCT
GAAGACGACGGTTATAGTTGCAGCAACCCCTGCTATAGCTACTGGGTGATGGAGAGAATT
CCCCTCCCTTGTCGCCTCTCCCACAATGGTGTTTCAATTCTGTCATTGCGCTCTCTCTTT
GGATTGGTTTTCCTGATTGCATTAATAGTGTACAAATGGAGAAGACAACACTTATCTATG
TACCAATCAATTGAAGACTTCCTGCAAATCCAGAGCAACTTTGTGCCAATTAAGTATTCC
TACTCTGAGATTAAGAAGATGACTAATAAATTCAAGGAAAAACTTGGTGAAGGAGCCTAT
GGAACTGTCTTTAAAGGAAAGCTACGCAGTGGTCCTTTTGTTGCAGTGAAGATGATGCAC
AAATCTATGACTAGTGGGCAAGAATTTATCAGTGAAGTTTCCACAATTGGAAGGATTCAT
CATGTTAATGTTGTGCAGCTCATTGGATTCTGTGTTGAGGGCTCGAAACGTGCTTTGGTA
TATGAGTTCATGCCTAATGGTTCCTTAGACAAGTACATATTTCTGCAAGAAGGAATTGTT
TCCTTGAGTTACAAACAAATGTTCGATATATCTCTAGGAGTTGCCCGTGGGGTAGAATAC
CTACATCGGGGCTGTGACATGCAGATCTTACATTTTGATATTAAGCCACATAACATTCTT
CTTGACGAAAATTTCAGCCCCAAAATATCTGACTTTGGGCTTGCCAAATTGTATCCAACA
GATGATAGTATAGTGAGCCTAACTGCAGCAAGAGGGACAATGGGTTACATGGCTCCAGAG
TTGTTTTACAAAAATATTGGAGGAATCTCATACAAAGCCGATGTATATAGTTATGGAATG
TTGTTGATGGAAATGGCAGGCAGAAGAAAGAACATGAGCCCATTTGCCGACCACTTAAGC
CAGATTTACTTTCCTACCTGGGTTTACGACCAATTCGATTTAGGAAATGACATAGAGATA
CAGGATGCCACCGATGAAGAAAGGAGCATGGTAAAGAAGATGATGATTGTGGCATTGTGG
TGCATACAGATGAAGCCGGCTGATCGTCCTGCAATGAACAAAGTTGTTGAAATGCTTGAA
GGAGATGATGAACTCCTACAGGAGCCCCCAAGACCTTTTATAGCTCCCCGTGAGATTAAT
GCTGGAGATGTTACTGAGACAATAAGAATATCCTGTGACATTCTAGGTGGTTAA

Peptide Sequence

PEP ID

XP_016445100.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like isoform X2 [Nicotiana tabacum]
Sequence

METRRTNITNSARLIIDDWILTSLPYSSHHTSHQCSLVPSADMMLERRLWIATLIVIICT
TIVKAQNVTHCTSSCGDIHNISFPFRLKADPHNCGDSRFELDCQNNRTVISLSTFISSDA
GIYNVLEINYDNFIIRAIDPGVEHQISRNCTTSPNNFRMFAPTASAFDSISSNRPILYVN
CLATVKSSSYVETTFCGSQNKTTTTSSESHSYLTTGQDMTISDLAENCSVEMVAWTSARG
LSVDNNSLSSIHAALTDGFELSWKRAFMCRECEARGAFCSEDDGYSCSNPCYSYWVMERI
PLPCRLSHNGVSILSLRSLFGLVFLIALIVYKWRRQHLSMYQSIEDFLQIQSNFVPIKYS
YSEIKKMTNKFKEKLGEGAYGTVFKGKLRSGPFVAVKMMHKSMTSGQEFISEVSTIGRIH
HVNVVQLIGFCVEGSKRALVYEFMPNGSLDKYIFLQEGIVSLSYKQMFDISLGVARGVEY
LHRGCDMQILHFDIKPHNILLDENFSPKISDFGLAKLYPTDDSIVSLTAARGTMGYMAPE
LFYKNIGGISYKADVYSYGMLLMEMAGRRKNMSPFADHLSQIYFPTWVYDQFDLGNDIEI
QDATDEERSMVKKMMIVALWCIQMKPADRPAMNKVVEMLEGDDELLQEPPRPFIAPREIN
AGDVTETIRISCDILGG

Transcript Sequence

Gene sequence data has not been registered.